Listar por autor "Torreño Tirado, Óscar"
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Accelerating exhaustive pairwise metagenomic comparisons
Perez-Wohlfeil, Esteban; Torreño Tirado, Óscar; Trelles-Salazar, Oswaldo Rogelio
(Springer, Cham, 2017-08-11)
In this manuscript, we present an optimized and parallel version of our previous work IMSAME, an exhaustive gapped aligner for the pairwise and accurate comparison of metagenomes. Parallelization strategies ... -
High performance computing in the cloud
(UMA Editorial, 2017-06-14)The numerous technological advances in data acquisition techniques allow the massive production of enormous amounts of data in diverse fields such as astronomy, health and social networks. Nowadays, only a small part of ... -
Pairwise and incremental multi-stage alignment of metagenomes: A new proposal
Perez-Wohlfeil, Esteban; Torreño Tirado, Óscar; Trelles-Salazar, Oswaldo Rogelio (Springer, 2017)
Traditional comparisons between metagenomes are often performed using reference databases as intermediary templates from which to obtain distance metrics. However, in order to fully exploit the potential of the information ... -
Paquete de R para análisis de redes epistáticas
(2016-11-30)Las mutaciones o cambios en la dotación genética de los organismos, son uno de los mecanismos básicos de la evolución de las especies. Estas pueden encontrarse en zonas codificantes o zonas no codificantes del genoma, ...