• DNA Sequences Alignment in Multi-GPUs: Energy Payoff on Speculative Executions 

      Pérez-Serrano, Jesús; Sandes, Edans; Melo, Alba; Ujaldon-Martinez, Manuel (2017-05-30)
      We present a performance per watt analysis of CUDAlign 4.0, a parallel strategy to obtain the optimal alignment of huge DNA se- quences in multi-GPU platforms using the exact Smith-Waterman method. Speed-up factors and ...
    • Smith-Waterman Acceleration in Multi-GPUs: A Performance per Watt Analysis 

      Pérez-Serrano, Jesús; Sandes, Edans; Melo, Alba; Ujaldon-Martinez, Manuel (Springer, 2017)
      We present a performance per watt analysis of CUDAlign 4.0, a parallel strategy to obtain the optimal alignment of huge DNA se- quences in multi-GPU platforms using the exact Smith-Waterman method. Speed-up factors and ...